Links to SpudDB Datasets / Download Pages / Genome Browsers

  • DM v6.1 - Improved reference genome assembly and annotation (v6.1) for the doubled monoploid potato DM 1-3 516 R44 - Pham, et al. (2020)
  • Phased Tetraploid Potato Genomes: Atlantic, Castle Russet, Avenger, Altus, Colomba, Spunta - Haplotype resolved tetraploid potato assemblies and annotation including Atlantic v3 update - Hoopes, et al. (2022)
  • RH89-039-16 v3 - Haplotype resolved genome and annotation the heterozygous diploid potato RH - Zhou, et al. (2020)
  • DM1S1 v1 - Genome assembly (v1) and genome annotation for the doubled monoploid potato DM1S1 - Jayakody, et al. (2020)
  • Jan v1.1 - Genome assembly and annotation for the diploid potato 'Jan' (v1.1) - Jiang Lab, Michigan State University (2024)
  • Cooperation-88 (C88) v1 - haplotype resolved assembly and annotation of the tetraploid potato C88 - Bao, et al. (2022)
  • Otava v1 - haplotype resolved assembly and annotation of the tetraploid potato Otava - Sun, et al. (2022)
  • Solanum chacoense M6 v5 -updated chromosome-scale genome assembly and genome annotation - Buell Lab
  • Solanum candolleanum v1 - chromosome-scale genome assembly and annotation - Buell Lab
  • M82 (SollycM82_v1) - Updated annotation for the PacBio HiFi M82 tomato genome (PMID: 36522651) that was annotated by the Buell Lab using RNA-seq and full-length cDNA sequences

Potato v2.0 Project - 20 Diploid Potato Haplotype Resolved Genome Assemblies and Genome Annotations


Legacy Data Sets


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This work is supported by grants from the National Science Foundation (IOS- 2140176), U.S. Department of Agriculture (2019-51181-30021), and funds from the Georgia Research Alliance, Georgia Seed Development, and University of Georgia.