Data Release for the Chromosome-scale and Haplotype-resolved Genome Assembly and Annotation of the Cultivated Autotetraploid Potato "Cooperation-88" (C88)

Authors:

Zhigui Bao, Canhui Li, Guangcun Li´╝îSanwen Huang (huangsanwen@caas.cn), Qian Zhou (zhouq02@pcl.ac.cn), et.al.

Genome Assembly and annotation for the cultivated autotetraploid potato "Cooperation-88" (C88)

Updated February 11, 2022

Genome Assembly:

  • C88.v1.fa.gz - Chromosome-scale, Haplotype-resolved genome assembly of the cultivated autotetraploid potato Cooperation-88 (C88) (v1 assembly)

Genome Annotation:

  • C88.v1.gene.gff3.gz - Genome annotation of the autotetraploid potato Cooperation-88 (C88) in GFF3 format
  • C88.v1.EDTA.TEanno.gff3.gz - Repeat annotation of the autotetraploid potato Cooperation-88 (C88) in GFF3 format
  • C88.v1.cdna.fa.gz - Transcript sequences (cDNA) of gene models of the autotetraploid potato Cooperation-88 (C88)
  • C88.v1.cds.fa.gz - Coding sequences (CDS) of gene models of the autotetraploid potato Cooperation-88 (C88)
  • C88.v1.pep.fa.gz - Protein sequences of gene models of the autotetraploid potato Cooperation-88 (C88)
  • C88.v1.interproscan.tsv.gz - Interpro results for the gene models of the autotetraploid potato Cooperation-88 (C88) in TSV format

Genome Browser: